This page brings together software, databases, web tools and methods commonly used in each subproject (e.g. cryo-EM, nuclear magnetic resonance spectroscopy, molecular dynamics calculations). The aim is to enable researchers from different fields to efficiently collect information in their respective fields and to promote interdisciplinary collaboration and sharing knowledge.
Cryo-electron microscopy (cryo-EM)
- Software
- Database
Nuclear magnetic resonance spectroscopy (NMR)
- Data processing
- Spectral Analysis
- Structure calculation
- Structure evaluation
- Chemical shift prediction from structure
- Automated signal assignment
- Relaxation Analysis
- Database
X-ray crystallography
- Synchrotron radiation facilities
- Software
- Model building
- Structure evaluation
- Database
Small angle X-ray scattering (SAXS)
- Small angle X-ray scattering (SAXS)
- Software
Protein structure prediction
- AlphaFold2
- RossetaFold
Molecular dynamics (MD) simulation
- MD software
- Force Field
- Special purpose super-computer
- Analysis tools
- Visualization tools
- MD tutorials
- Web server
- Database
- Simulation movies (YouTube)
